Conformation of phylogenetic relationship of penaeidae shrimp based on Morphometric and Molecular investigations

Understanding of accurate phylogenetic relationship among Penaeidae shrimp is important for academic and fisheries industry. The Morphometric and Randomly Amplified Polymorphic DNA (RAPD) analysis was used to make the phylogenetic relationsip among 13 Penaeidae shrimp. For morphometric analysis fort...

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Автори: Rajakumaran, P., Vaseeharan, B., Jayakumar, R., Chidambara, R.
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Цитувати:Conformation of phylogenetic relationship of penaeidae shrimp based on Morphometric and Molecular investigations / P. Rajakumaran, B. Vaseeharan, R. Jayakumar, R. Chidambara // Цитология и генетика. — 2014. — Т. 48, № 6. — С. 17-24. — Бібліогр.: 52 назв. — англ.

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spelling irk-123456789-1266702017-12-02T03:03:19Z Conformation of phylogenetic relationship of penaeidae shrimp based on Morphometric and Molecular investigations Rajakumaran, P. Vaseeharan, B. Jayakumar, R. Chidambara, R. Оригинальные работы Understanding of accurate phylogenetic relationship among Penaeidae shrimp is important for academic and fisheries industry. The Morphometric and Randomly Amplified Polymorphic DNA (RAPD) analysis was used to make the phylogenetic relationsip among 13 Penaeidae shrimp. For morphometric analysis forty variables and total lengths of shrimp were measured for each species, and removed the effect of size variation. The size normalized values obtained was subjected to UPGMA (Unweighted Pair-Group Method with Arithmetic Mean) cluster analysis. For RAPD analysis, the four primers showed reliable differentiation between species, and used correlation coefficient between the DNA banding patterns of 13 Penaeidae species to construct UPGMA dendrogram. Phylogenetic relationship from morphometric and molecular analysis for Penaeidae species found to be congruent. We concluded that as the results from morphometry investigations concur with molecular one, phylogenetic relationship obtained for the studied Penaeidae are considered to be reliable. Понимание точных филогенетических отношений у креветок Penaeidae важно как с общенаучной точки зрения, так и для рыбной промышленности. RAPD анализ был использован для установления филогенетических связей 13 видов креветок Penaeidae. Для морфометрических анализов измерены 40 переменных и общих длин креветок для каждого вида и устранен эффект вариабельности размера. Показатели нормализованного размера обработаны с помощью кластерного анализа UPGMA (Unweighted Pair-Group Method with Arithmetic Mean). При RAPD анализе четыре праймера показали достоверные различия между видами. Коэффициенты корреляции между паттернами ДНК использованы для построения UPGMA дендрограмм. Филогенетические связи, построенные на основе морфометрических и молекулярных анализов, совпали, что позволило сделать вывод об их достоверности. 2014 Article Conformation of phylogenetic relationship of penaeidae shrimp based on Morphometric and Molecular investigations / P. Rajakumaran, B. Vaseeharan, R. Jayakumar, R. Chidambara // Цитология и генетика. — 2014. — Т. 48, № 6. — С. 17-24. — Бібліогр.: 52 назв. — англ. 0564-3783 DOI: 10.3103/S0095452714060103 http://dspace.nbuv.gov.ua/handle/123456789/126670 en Цитология и генетика Інститут клітинної біології та генетичної інженерії НАН України
institution Digital Library of Periodicals of National Academy of Sciences of Ukraine
collection DSpace DC
language English
topic Оригинальные работы
Оригинальные работы
spellingShingle Оригинальные работы
Оригинальные работы
Rajakumaran, P.
Vaseeharan, B.
Jayakumar, R.
Chidambara, R.
Conformation of phylogenetic relationship of penaeidae shrimp based on Morphometric and Molecular investigations
Цитология и генетика
description Understanding of accurate phylogenetic relationship among Penaeidae shrimp is important for academic and fisheries industry. The Morphometric and Randomly Amplified Polymorphic DNA (RAPD) analysis was used to make the phylogenetic relationsip among 13 Penaeidae shrimp. For morphometric analysis forty variables and total lengths of shrimp were measured for each species, and removed the effect of size variation. The size normalized values obtained was subjected to UPGMA (Unweighted Pair-Group Method with Arithmetic Mean) cluster analysis. For RAPD analysis, the four primers showed reliable differentiation between species, and used correlation coefficient between the DNA banding patterns of 13 Penaeidae species to construct UPGMA dendrogram. Phylogenetic relationship from morphometric and molecular analysis for Penaeidae species found to be congruent. We concluded that as the results from morphometry investigations concur with molecular one, phylogenetic relationship obtained for the studied Penaeidae are considered to be reliable.
format Article
author Rajakumaran, P.
Vaseeharan, B.
Jayakumar, R.
Chidambara, R.
author_facet Rajakumaran, P.
Vaseeharan, B.
Jayakumar, R.
Chidambara, R.
author_sort Rajakumaran, P.
title Conformation of phylogenetic relationship of penaeidae shrimp based on Morphometric and Molecular investigations
title_short Conformation of phylogenetic relationship of penaeidae shrimp based on Morphometric and Molecular investigations
title_full Conformation of phylogenetic relationship of penaeidae shrimp based on Morphometric and Molecular investigations
title_fullStr Conformation of phylogenetic relationship of penaeidae shrimp based on Morphometric and Molecular investigations
title_full_unstemmed Conformation of phylogenetic relationship of penaeidae shrimp based on Morphometric and Molecular investigations
title_sort conformation of phylogenetic relationship of penaeidae shrimp based on morphometric and molecular investigations
publisher Інститут клітинної біології та генетичної інженерії НАН України
publishDate 2014
topic_facet Оригинальные работы
url http://dspace.nbuv.gov.ua/handle/123456789/126670
citation_txt Conformation of phylogenetic relationship of penaeidae shrimp based on Morphometric and Molecular investigations / P. Rajakumaran, B. Vaseeharan, R. Jayakumar, R. Chidambara // Цитология и генетика. — 2014. — Т. 48, № 6. — С. 17-24. — Бібліогр.: 52 назв. — англ.
series Цитология и генетика
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fulltext ISSN 0564–3783. Öèòîëîãèÿ è ãåíåòèêà. 2014. Ò. 48. ¹ 6 17 Understanding of accurate phylogenetic relationship among Penaeidae shrimp is important for academic and fisheries industry. The Morphometric and Randomly amplified polymorphic DNA (RAPD) analysis was used to make the phylogenetic relationsip among 13 Penaeidae shrimp. For morphometric analysis forty variables and total lengths of shrimp were measured for each species, and removed the effect of size variation. The size normalized values obtained was subjected to UPGMA (Unweighted Pair-Group Method with Arithmetic Mean) cluster analysis. For RAPD analysis, the four primers showed reliable differentiation between species, and used correlation coefficient between the DNA banding patterns of 13 Penaeidae species to construct UPGMA dendrogram. Phylogenetic relationship from morphometric and molecular analysis for Penaeidae species found to be congruent. We concluded that as the results from morphometry investigations concur with molecular one, phylogenetic relationship obtained for the studied Penaeidae are considered to be reliable. Key words: Penaeidae, shrimp, morphometry, RAPD, phylo- geny. Introduction. Penaeidae shrimps worldwide are classified into 26 genera and 225 species, of which 13 genera are found along the Indian coasts. It is a diverse and worldwide distributed family of shrimps, particularly in the Indo-West Pacific re- gion and contributes to 50 % of crustacean fisher- ies in the world [1]. In India Penaeidae shrimps constitute a highly valuable fishery along the East and West coasts. The estimated Indian landings of Penaeidae shrimps in 2010 was 2,17,900 mt, contributing 51 % of total crustacean landings [2]. Generally, the Penaeidae shrimp differ from non Penaeidae by pattern of arranging of pleurae regularly, third pereopods chelated and abdominal segment do not has sharp bend but non Penaeidae prawns the pleurae of the second abdominal segment are overlapping those of first and third segments; third pereopods not chelated and abdominal seg- ment has sharp bend in the non Penaeidae prawns. Moreover in Penaeidae shrimp, the distinguished identical characters are the rostral structure, rostral teeth, antenna colouration and body colour with strips. In majority of the Penaeidae shrimp, rostral teeth are important characters to distinguish the dif- ferent species and also within the groups. In Penaeus sensu lato group, the rostral teeth are present both in the upper and lower portions of the rostrum, and but in other case, the rostral teeth are present only in the dorsal side of the rostrum. Moreover depend- ing on the nature of carapace the Penaeus sensu lato can be divided as Melicertus (grooved) and non- Melicertus (non-grooved). Carapace with longitu- dinal suture, lacking transverse suture and fourth and fifth pairs of pereopods with elongate dactyl subdivided into articles in Xiphopenaeus, carapace with longitudinal, transverse sutures, and fourth and fifth pair of pereopods with dactyl neither elongate nor subdivided into articles in Trachypenaeus. Penaeidae into three tribes according to the characters of gill formula (presence or absence of epipod on the third maxilliped and pleurobranch on the fifth pereopod), spination of the antennular peduncle (presence or absence of a spine on the ventromedian margin of proximal segment) and the telson (tip simple or trifid), namely the Peneini (Penaeus, Heteropenaeus, Funchalia, Pelagopena- eus), the Parapeneini (Parapenaus, Artemesia, Pe- naeopsis, Metapenaeopsis), and the Trachypeneini (Metapenaeus, Macropetasma, Trachypenaeopsis, Aty- popenaeus, Protrachypene, Xiphopenaeus, Parape- naeopis, Trachypenaeus) [3]. Penaeidae shrimp, on the basis of complex morphological similarity matrix into five groups; 1) Penaeus; 2) Penaeopsis; 3) At- popenaeus, Trachypenaeopsis, Metapenaeus; 4) Para- penaeus, Parapenaeopsis, Trachypenaeus; 5) Metape- naeopis [4]. The extraordinary morphological diversity among these species poses substantial challenge to their phylogenetic study. Limited fossil records and in- © P. RAJAKUMARAN, B. VASEEHARAN, R. JAYAKUMAR, R. CHIDAMBARA, 2014 CONFORMATION OF PHYLOGENETIC RELATIONSHIP OF PENAEIDAE SHRIMP BASED ON MORPHOMETRIC AND MOLECULAR INVESTIGATIONS P. RAJAKUMARAN 1, B. VASEEHARAN 1, R. JAYAKUMAR 2, R. CHIDAMBARA 3 1 Crustacean Molecular Biology and Genomics Lab, Department of Animal Health and Management, Alagappa University, India 2 Mandapam Regional Centre, Central Marine Fisheries Research Institute (CMFRI), Mandapam Camp – 623520, Tamil Nadu, India 3 R&D Department, National Prawn Co., Al-Laith 21961, Jeddah, Saudi Arabia E-mail: vaseeharanb@gmail.com ISSN 0564–3783. Öèòîëîãèÿ è ãåíåòèêà. 2014. Ò. 48. ¹ 618 P. Rajakumaran, B. Vaseeharan, R. Jayakumar, R. Chidambara complete palaeogeographic evidences are of little significant in phylogenetic studies of Penaeidae [5, 6]. The system of morphometric measurements called the truss network system have been widely used for population and taxonomic studies [7–11]. The conservation of body skeleton and definite bo- dy ratio facilitated using trussnet work system as a taxonomical tool to differentiate physically similar species and compared to traditional morphologi- cal method such tool can be used as clear, ac- curate and precise descriptor [12]. The morpho- metric measurements have been used to describe the taxonomical relationship between Melicertus ke- rathurus, Metapenaeus dobsoni and Penaeus semisul- catus [13]. Apart from morphological characters, the shape and size evolutionary relationship species of Penaeidae species is limited. Hence in the present study the truss network system was used to analyses the phylogenetic relationship by morphometry with concerning shape and size. The molecular analysis using PCR-based mar- kers has been of great significance on studying the phylogeny and taxonomy. Random amplification of polymorphic DNA (RAPD) is random amplifica- tion of anonymous loci by PCR. The method is simple, rapid and cheap, has high polymorphism, requires only a small amount of DNA and al- lows creation of genomic markers from species of which little information is known about the target sequences to be amplified. RAPD markers are pro- duced by PCR using short oligonucleotide primers of random sequences. Different RAPD patterns arise when genomic regions vary according to the presence/absence of complementary primer anne- aling sites. RAPDs have gained considerable at- tention particularly in population genetics, species and subspecies identification, phylogenetics, link- age group identification, chromosome and genome mapping, analysis of interspecific gene flow and hybrid speciation, and analysis of mixed genome samples breeding analysis and as a potential sour- ce for single-locus genetic fingerprints [14]. Ran- domly amplified polymorphic DNA (RAPD) data showed higher levels of polymorphism than allo- zymes [15]. Allozyme has limitations for highly divergent group [15, 16]. The robust taxonomy is both the morphological and molecular data agreement [17]. Molecular data are a complementary approach to morphology, es- pecially in discriminating cryptic or sibling species [18, 19] and for constructing phylogenetic relation- ships [15]. Raymunida – squat lobsters (formerly in genus Munida), distinguished by small morphologi- cal differences, which matched clear differences in mitochondrial nucleotide sequences [20]. Data are available from studies of mitochondrial marker like Cytochrome oxidase subunit I, and 12S and 16S rRNA (ribosomal RNA). However, analyses by non nuclear marker alone or combined, still have not provided a reliable taxonomy for Penaeidae shrimps. Nuclear DNA marker only provides high resolution to resolve the evolutionary relationship of the shrimp [6, 21]. Only mitochondrial DNA marker observation is available on Penaeidae phylogeny [22, 23], but lot of studies on phylogeny of super family Penaeoidea are there, where only the least explanation about the Penaeidae shrimp as one of the family along with four other family Aristaeidae, Solenoceridae, Benthe- sicymidae, Sicyonidae [24–26]. Moreover the other studies are Penaeus sensu lato [27, 28] and Penaeus sensu stricto [29–31]. Previously several morphometric and genetic analysis were conducted for species varia- tion and systematic studies for various fishes [32–35]. Currently, there is no report available on phylogenetic relationship of Penaeidae species analysed employ- ing both morphometry and Nuclear DNA molecular marker. In the present study, we have used both the techniques, with diverse shrimp, to conform the phy- logenetic relationship of Penaeidae shrimp species. Materials and methods. Collection of samples. Six species from Penaeus genus (1) Fenneropenaeus indicus (H. Milne Edwards, 1837), (2) Fennero- penaeus merguiensis (De Man, 1888), (3) Melicer- tus latisulcatus (Kishinouye, 1896), (4) Penaeus monodon (Fabricius, 1798), (5) Penaeus semisulca- tus (De Haan, 1844), (6) Marsupenaeus japonicus (Bate, 1888); three species from Parapenaeopsis genus (1) Parapenaeopsis stylifera (H. Milne Ed- wards, 1837), (2) Parapenaeopsis hardwickii (Miers, 1878), (3) Parapenaeopsis uncta (Alcock, 1905); two species form Metapenaeus genus (1) Metapenaeus monoceros (Fabricius, 1798), (2) Metapenaeus dob- soni (Miers, 1878), Metapenaeus affinis (H. Milne Edwards, 1837) and one species from Penaeopsis genus Penaeopsis jerryi (Perez Farfante, 1979), to- tally thirteen species were collected from the East coast of India. All species were identified according to published literature [36–38]. Multivariate cluster analysis of morphometric da- ta. After identification of species, from each spe- ISSN 0564–3783. Öèòîëîãèÿ è ãåíåòèêà. 2014. Ò. 48. ¹ 6 19 Conformation of phylogenetic relationship of Penaeidae shrimp based on morphometric cies 5 male sample only taken and female omitted due to size variation. The measurement were taken on the basis of truss net work system (Fig. 1) in which eighteen landmarks, forty factor or variables plus total length of each shrimp (tip of rostrum to end of telson), totally forty one variables. From the five sample of each species the average value was taken. The significant correlations were observed between average morphometric measurement and size of the species. Hence for removing the effect of size variation for all species, the transforma- tion of absolute measurement to size independent variable were carried out, in which the formula Madj = M(Ls/Lo) b was used [39]. Where Madj the size adjusted measurement of each variable, M is the original measurement of each variable, Lo the standard length of shrimp (total length from tip of rostrum to end of telson) and Ls the overall mean of measurement for all shrimp for each vari- able. Allometric vs. standard estimates allometric coefficients with respect to standard. The standard variable was placed in the first column and each additional column is regressed onto the first column after log-transformation, giving a slope (allometric coefficient) b for that variable. The Ls/Lo is com- puted in the excel sheet and detecting the b param- eter was carried out using paleontological statistics software (PAST) package version 1.93. From these sizes adjusted morphometric measurements for each species were subjected to UPGMA multivari- ate cluster analysis. Euclidean method (statistic tool that quantifies the extent to which species within clusters are similar to one another) was followed to detect the morphometrical relationship of Penaei- dae studied using paleontological statistics software (PAST) package (Table 1–3 –http://cytgen.com/ articles/4860017s.pdf). DNA isolation. Total genomic DNA was isolat- ed from muscle tissue by SDS-phenol/chloroform method described with slight modifications [40]. Briefly, shrimp muscle (200 mg) was cut into small pieces, crushed using a sterile porcelain mortar and pestle with 1 ml of chilled TEN buffer (50 mM Tris- HCl, pH 8.0, 50 mM EDTA and 100 mM NaCl), and transferred to 2 ml Eppendorf tube. Protein- ase K 8 l (300 mg/ml), sucrose 20 l (2 %), and 20 l sodium dodecyl sulfate SDS (2 %) were added to the tube. After overnight incubation at 60 ºC, the lysate was extracted once with phenol and twice with chloroform/isoamyl alcohol. DNA was pre- cipitated with isopropanol, washed once with 70 % ethyl alcohol, and suspended in TE (Tris EDTA, pH 8.0) buffer. DNA quality and quantity were determined by Agarose gel electrophoresis and Bio- photometer plus («Eppendorf», Germany). RAPD-PCR amplification and data analysis. Eighteen primers were used for RAPD analysis. DNA amplification reactions were performed in 200 mol/l each dNTP, 2 mmol/l MgCl2, 19 stan- dard Taq polymerase buffer, 0.2 mol/l random primer, 40 ng genomic DNA and 0.75 U Taq poly- merase in a final volume of 25 l. PCR conditions included initial denaturation at 94 ºC for 5 min, followed by 45 cycles of denaturation at 94 ºC for 30 s, annealing at 35 ºC for 1 min, extension at 72 ºC for 2 min and final extension at 72 ºC for 10 min. The amplified DNA was separated by electropho- resis through 2 % agarose gel containing Ethidium bromide in 1×TBE buffer at a constant 80 V. To maintain consistency, only the repeatable major bands ranging from 10 000 to 1000 bp were scored. Molecular weights of amplified bands were esti- mated by comparing with known molecular weight marker (1 Kbp DNA ladder, Bangalore Genie, In- dia). DNA profiles generated for all samples were compared in a pairwise manner. RAPD banding patterns were recorded on spread sheets as binary matrix marking alleles absent (0) and present (1). The similarity index between species [41] and sub- sequently the data used to construct a dendrogram using the (UPGMA) algorithm, as described [42]. Results. Morphometrical relationship. When con- verting the actual measurement value into size stan- daisation value, there were lot of variation between two kinds of value for most morphometrical vari- Fig. 1. The truss network system ISSN 0564–3783. Öèòîëîãèÿ è ãåíåòèêà. 2014. Ò. 48. ¹ 620 P. Rajakumaran, B. Vaseeharan, R. Jayakumar, R. Chidambara able. The size adjusted value for all variables for all species described the relationship of species. This values were relatively closeness for Penaeus species, Metapenaeus, Parapenaeopsis and Penaeopsis jerryi. While these size adjusted morphometric value of all variables subjected to UPGMA cluster analysis, produced 10 clades. The first clade included P. jer- ryi, M. latisulcatus second, M. japonicus third, P. monodon – F. indicus fourth, F. merguiensis fifth, P. semisulcatus sixth, M. affinis seventh, M. brevi- cornis – M. dobsoni eighth, P. uncta ninth, and P. stylifera – P. hardwickii tenth (Fig. 2). Genetic relationship. For RAPD molecular analysis, among 18 primers used, 10 primers responded, but only four primer RM03 5 AAT CGG GCT G 3 , RM07 5 CAA TGC CCG T 3 , RM014 5 GTA TTG CCC T 3 , RM017 5 TCC CTC GTG C 3 generated good and reproducible RAPD profiles for all the species stud- ied. Totally 99 major DNA bands produced, 11 bands polymorphic. The most number of banding pattern were similar for F. indicus and P. monodon; P. semis- ulcatus and F. merguiensis; M. latisulcatus and M. ja- ponicus; P. stylifera, P. hardwickii and P. uncta. P. jerryi banding pattern vary, however most of the bands close to Metapenaeus and Parapenaeopsis species (Fig. 3). Genetic similarity values range form 0–1 for all iso- lates, and high similarity value for Penaeus genus of non-Melicertus clade species of F. merguiensis P. semisulcatus, F. indicus, P. monodon, than Melicertus clade species of M. japonicus and M. latisulcatus. As for Metapenaeus genus, the genetic similarity val- ue for the species, M. affinis, M. dobsoni, M. bre- vicornis were closely related, and Parapenaeopsis ge- nus the species of P. stylifera, P. hardwickii, P. uncta were coming closely. Penaeopsis species P. jerryi genetic similarity value close to Metapenaeus and the Parapenaeopsis. As construction of UPMGA dendrogram based on genetic similarity, producing 9 clades, in which the order of relationship that M. marsupenaeus – M. latisulcatus in first clade, P. monodon – F. indicus in second, P. semisulcatus – F. merguiensis in third, P. jerryi, in fourth, M. affinis in fifth, M. monoceros – M. dobsoni sixth, P. uncta in sev- enth, P. hardwickii – P. stylifera eighth in ninth (Fig. 4). Fig. 2. Phylogeny of shrimps based on morphometric analysis using PAST Package ISSN 0564–3783. Öèòîëîãèÿ è ãåíåòèêà. 2014. Ò. 48. ¹ 6 21 Conformation of phylogenetic relationship of Penaeidae shrimp based on morphometric Discussions. In the present study the compre- hensive investigation of phylogenetic relationship of Penaeidae species by increasing number of mor- phometrical trait using truss net work system and many primer for RAPD analysis, resulting con- firmed the phylogenetic relationship of this family. Penaeidae shrimps differ in variety of morphologi- cal characteristics that are the expression of genetic differences among them. There are, numerous stud- ies of the morphological differences among spe- cies which can be used for taxonomic distinctions. Morphometric is a quantitative study of pattern of covariance with shape [43] and many morphologi- cal attributes of biological form are obviously re- flection of evolutionary process [44–46], and since assessment of pattern of morphologically variation have been traditionally to infer phylogenetic rela- tion [47–49] it would seem be natural to assume that morphometric analyses would play a large role in phylogenetic studies. The most of morphometri- cal trait are unique for a species of Penaeidae in our analysis, the closely related valued species more phylogenetic related than other. Thus the morpho- metric characters are describing the phylogenetic relationship among tested penaeidae. Though RAPDs are not sensitive to large-scale length mutations, hence the variation might be un- derestimated as the technique is based on the PCR amplification of discrete regions of genome. The us- ing of high number of primer in the present study, among which the four producing good amplification for all sample, hence the probability of reliability is high in the present study. Detecting the phylogenetic relatedness of species, on basis of DNA banding pat- tern the among them. Thus both morphometry and RAPD tool are helping to detect the phylogenetic relationship of Penaeidae in the present study. The phylogenetic relationship based on morpho- logical traits such as grooved, non grooved on the carapace, last abdominal somite, presence hepatic ridge, shape of petasma, nature of thylecum open or closed and coloration are used by [3, 4] and [37] Fig. 3. RAPD profile of shrimps generated by polymerase chain reaction using four primer: M – Marker, Fi – F. indicus, Pm – P. monodon, Ps – P. semisulcatus, Fm – F. merguiensis, Ml – M. latisulcatus, Mj – M. japonicus, Mb – M. brevicornis, Md – M. dobsoni, Ma – M. affinis, Pas – P. stylifera, Pah – P. hardiwickii, Pau – P. uncta, Pj – P. jerryi_Line shows similarity of DNA bands (Monomeric) ISSN 0564–3783. Öèòîëîãèÿ è ãåíåòèêà. 2014. Ò. 48. ¹ 622 P. Rajakumaran, B. Vaseeharan, R. Jayakumar, R. Chidambara for Penaeus s.l. not that much influence on evo- lutionary relationship, because these morphological characters could be diverged by sexual selection and convergent evolution, plesiomorphic, so the Penae- us s.l. group is to put old Penaeus genus, which is both morphological and molecular data agreement [32]. In the present study using both analyses, as for Penaeus sensu lato, the Melicertus and Penae- us sensu stricto (Non-Melicertus) are paraphyletic which concurrent with previous phylogenetic stud- ies [27, 28, 31, 50, 51]. The Fenneropenaeus and Penaeus s.s. are sharing their relationship, since P. monodon and P. semisulcatus combined with F. indi- cus and F. merguensis these observation stand on the view [22 28]. Thus Penaeus s.s., Fenneropanaeus, Farfantepenaeus and Litopenaeus could be put on another clade against Melicertus as non Melicertus. In other Panaeidae genus such Metapenaeus and Parapenaeopsis, which are coming as closely in both analyses. This classification prevents the confusion of academic and fishery industry. New studies should be improved than prediction of previous studies, in present study using four genera of Penaeidae family described not only evolution- ary relationship but also interspecies relationship at genus level. For example as for Metapeneus species M. dobsoni and M. brevicornis are closely related than M. affinis. Parapenaeopsis species P. stylifera and P. hardwickii are closely related than P. uncta. The P. jerryi single species in Penaeopsis genus, which as one of the sister genus in the Penaeidae family as given by [3, 4] which form separate clade. In the present study stand on [3] view that the tribe Peneini diverged earlier than other two tribes, with tribe Parapeneini and Trachypeneini sharing common ancestor, Penaeidae form a monophyletic group with a Penaeus shrimp as a common ancestor. Our phylognetic observations also agree with find- ings that evolutionary polarity of family was from Penaeus to Trachypenaeus [52]. When combined investigation of both morphometrical and genetical (RAPD) analysis of Penaeidae species, the result that both analysis outcomes are concurrent. The taxo- nomical relationship of genus Penaeus, in which the Melicertus and non Melicertus clade; Metapenaeus, Parapenaeopsis and Penaeopsis are high agreement in both analyses. Phylogenetic relationship devel- oped through this study, not only helping conserva- tion, systematic, ecological and evolutionary studies would also help to produce superior captive shrimp with economical trait strains through hybridization of closely related species. Conclusion. In the present study, phylogenetic relationship of different genera Penaeus, Metape- naeus, Parapenaeopsis, and Penaeopsis reported based on molecular tool is congruent with mor- phometric one. Thus it could be concluded that morphometrical traits using truss net work system more useful for phylogenic studies of Penaeidae than traditional morphological and meristematic traits. The comparative account of genetic (RAPD) and morphometric based results would be a reliab- le tool for confirmation of phylogenetic relation- ship of these economically important species. Fur- ther studies also needed to increase the numbers of Penaeidae species. I express my sincere gratitude to Department of Sci- ence and Technology, New Delhi, India for the financial assistance provided through DST-PURSE programme. ÑÒÐÓÊÒÓÐÀ ÔÈËÎÃÅÍÅÒÈ×ÅÑÊÈÕ ÑÂßÇÅÉ ÊÐÅÂÅÒÎÊ PENAEIDAE ÍÀ ÎÑÍÎÂÅ ÌÎÐÔÎÌÅÒÐÈ×ÅÑÊÈÕ È ÌÎËÅÊÓËßÐÍÛÕ ÈÑÑËÅÄÎÂÀÍÈÉ P. Rajakumaran, B. Vaseeharan, R. Jayakumar, R.Chidambara Ïîíèìàíèå òî÷íûõ ôèëîãåíåòè÷åñêèõ îòíîøåíèé ó êðåâåòîê Penaeidae âàæíî êàê ñ îáùåíàó÷íîé òî÷êè çðåíèÿ, òàê è äëÿ ðûáíîé ïðîìûøëåííîñòè. RAPD Fig. 4. Phylogenetic relatioship of Penaeidae shrimps as per RAPD analysis using UPGMA algorithm ISSN 0564–3783. Öèòîëîãèÿ è ãåíåòèêà. 2014. Ò. 48. ¹ 6 23 Conformation of phylogenetic relationship of Penaeidae shrimp based on morphometric àíàëèç áûë èñïîëüçîâàí äëÿ óñòàíîâëåíèÿ ôèëî- ãåíåòè÷åñêèõ ñâÿçåé 13 âèäîâ êðåâåòîê Penaeidae. Äëÿ ìîðôîìåòðè÷åñêèõ àíàëèçîâ èçìåðåíû 40 ïå- ðåìåííûõ è îáùèõ äëèí êðåâåòîê äëÿ êàæäîãî âèäà è óñòðàíåí ýôôåêò âàðèàáåëüíîñòè ðàçìåðà. Ïîêà- çàòåëè íîðìàëèçîâàííîãî ðàçìåðà îáðàáîòàíû ñ ïî- ìîùüþ êëàñòåðíîãî àíàëèçà UPGMA (Unweighted Pair-Group Method with Arithmetic Mean). Ïðè RAPD àíàëèçå ÷åòûðå ïðàéìåðà ïîêàçàëè äîñòîâåðíûå ðàç- ëè÷èÿ ìåæäó âèäàìè. Êîýôôèöèåíòû êîððåëÿöèè ìåæäó ïàòòåðíàìè ÄÍÊ èñïîëüçîâàíû äëÿ ïîñòðîå- íèÿ UPGMA äåíäðîãðàìì. Ôèëîãåíåòè÷åñêèå ñâÿçè, ïîñòðîåííûå íà îñíîâå ìîðôîìåòðè÷åñêèõ è ìîëå- êóëÿðíûõ àíàëèçîâ, ñîâïàëè, ÷òî ïîçâîëèëî ñäåëàòü âûâîä îá èõ äîñòîâåðíîñòè. REFERENCES 1. FAO Technical Guidelines for Responsible Fisheries. Genetic Resource Management, Food and Agriculture Organization. – Rome: FAO, 2008, ¹ 5. – P. 125. 2. 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